TDbasedUFE - Tensor Decomposition Based Unsupervised Feature Extraction
This is a comprehensive package to perform Tensor decomposition based unsupervised feature extraction. It can perform unsupervised feature extraction. It uses tensor decomposition. It is applicable to gene expression, DNA methylation, and histone modification etc. It can perform multiomics analysis. It is also potentially applicable to single cell omics data sets.
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geneexpressionfeatureextractionmethylationarraysinglecellbioinformaticsdna-methylationgene-expression-profileshistone-modificationsmultiomicstensor-decomposition
5.95 score 5 stars 1 dependents 20 scripts 306 downloadsMiRaGE - MiRNA Ranking by Gene Expression
The package contains functions for inferece of target gene regulation by miRNA, based on only target gene expression profile.
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immunooncologymicroarraygeneexpressionrnaseqsequencingsage
3.91 score 41 scripts 728 downloadsTDbasedUFEadv - Advanced package of tensor decomposition based unsupervised feature extraction
This is an advanced version of TDbasedUFE, which is a comprehensive package to perform Tensor decomposition based unsupervised feature extraction. In contrast to TDbasedUFE which can perform simple the feature selection and the multiomics analyses, this package can perform more complicated and advanced features, but they are not so popularly required. Only users who require more specific features can make use of its functionality.
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geneexpressionfeatureextractionmethylationarraysinglecellsoftwarebioconductor-packagebioinformaticstensor-decomposition
3.30 score 10 scripts 338 downloadsmiRNATarget - gene target tabale of miRNA for human/mouse used for MiRaGE package
gene target tabale of miRNA for human/mouse used for MiRaGE package
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experimentdatahomo_sapiens_datadatapkg
3.30 score 3 scripts